structure name | RNA POLYMERASE II PRE-INITIATION COMPLEX WITH CLOSED PROMOTER DNA IN DISTAL POSITION |
source | HOMO SAPIENS / SUS SCROFA |
experiment | NMR |
structural superfamily | Cyclin-like;Zinc beta-ribbon;Transcription factor IIA TFIIA, beta-barrel domain;Transcription factor IIA TFIIA, alpha-helical domain;TATA-box binding protein-like;Rap30/74 interaction domains;"Winged helix" DNA-binding domain;Eukaryotic RPB5 N-terminal domain;RPB5-like RNA polymerase subunit; |
reference complex | 5iy6_M 5iy6_N 5iy6_P 5iy6_T 7nvy_E |
links to other resources | NAKB PDIdb DNAproDB |
protein sequence | |
interface signature | SHKKH/R/S/NVFALFVTNVFPLFVT/K/ |
Estimated binding specificities ?
contact |
A | 0 12 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 0 0 12 0 6 78 0 84 C | 84 12 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 96 0 12 0 0 6 0 0 G | 12 66 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 0 0 12 0 0 6 0 6 T | 0 6 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 24 0 96 60 96 90 6 96 6scan! |
home
updated Sun Dec 17 08:12:29 2023