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legend  pdf

structure nameRNA POLYMERASE II INITIALLY TRANSCRIBING COMPLEX (ITC)
sourceSACCHAROMYCES CEREVISIAE
experimentNMR
structural superfamilyTATA-box binding protein-like;Transcription factor IIA TFIIA, beta-barrel domain;Transcription factor IIA TFIIA, alpha-helical domain;"Winged helix" DNA-binding domain;Zinc beta-ribbon;
reference complex5oqj_O 5oqj_U 5oqj_X 7ml0_W
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureK/NVFLFTNVFPLFVT/K

Estimated binding specificities ?

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# IC=7.099 IC/col=1.014 n_of_columns=7 specificity:   
A |  16  13   0  96   0  96   0
C |  13  16   0   0   0   0   0
G |  13  13   0   0   0   0   0
T |  54  54  96   0  96   0  96
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updated Sun Dec 17 07:16:56 2023