7lrm_CD : 3D-footprint complex

structure name	STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH DNA, DCTP, AND CA(2+) ION
reference	Ruiz et al. 'Drug 27 1832 2022
source	HUMAN IMMUNODEFICIENCY VIRUS TYPE 1
experiment	X-ray (resolution=3.14, R-factor=?)
structural superfamily	DNA/RNA polymerases;Ribonuclease H-like;
reference complex	6o9e_B 7ozw_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7lrm_C interface=61,74,94,115,151,157,183,184,265,448,475,501, pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvFaikkkdstkwrkLvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpQgwkgsPaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtnsqYalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvs > 7lrm_D interface= etvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkKdstkwrklvdfrElnkrtqdfwevqlgiphpaGlkkkksvtvldvgdayfsvpLdedfrkytaftipsinnetpgiryqynvlpqgwkgSpaifqSsmtkilepfkkqnpdiviyqymddlYVgsdleigqhrtkieelrqhllrwgpflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskLlrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwy
interface signature	FLIYQPYMNRQY/KEGLSSYVL

Estimated binding specificities ?

contact

# IC=9.003 IC/col=0.281 n_of_columns=32

specificity:

A |   0   9   7  24   9  24  24  24  24  24  24  24  24  24   0  24   0  24  24  24  24  24  24  24  24  24  24  24  24   7   0   0
C |   0  73  75  24  73  24  24  24  24  24  24  24  24  24   0  24   0  24  24  24  24  24  24  24  24  24  24  24  24   7   0   0
G |  96   7   7  24   7  24  24  24  24  24  24  24  24  24   0  24   0  24  24  24  24  24  24  24  24  24  24  24  24  75  96  96
T |   0   7   7  24   7  24  24  24  24  24  24  24  24  24  96  24  96  24  24  24  24  24  24  24  24  24  24  24  24   7   0   0

scan!

home
updated Sun Dec 17 05:39:35 2023