| structure name | CRYOEM STRUCTURE OF HIV-1 CONSERVED INTASOME CORE (INTEGRASE) |
| source | HUMAN IMMUNODEFICIENCY VIRUS 1 |
| experiment | NMR |
| structural superfamily | Ribonuclease H-like;N-terminal Zn binding domain of HIV integrase;DNA-binding domain of retroviral integrase; |
| sequence family | Integrase core domain; Integrase Zinc binding domain; Integrase DNA binding domain; |
| multimeric complexes | 6u8q_AJP 6u8q_CIM 6vdk_AJP 6vdk_CIM 8fn7_ACD 8fn7_GIJ 8fnd_ACD 8fnd_GIJ 8fng_ACD 8fng_GJ 8fnh_ACD 8fnh_GHIJ 8fnj_ACD 8fnj_GIJ 8fnl_ACD 8fnl_GIJ 8fnm_ACD 8fnm_GIJ 8fnn_ACD 8fnn_GIJ 8fno_ACD 8fno_GJ 8fnp_AD 8fnp_GIJ 8fnq_ACD 8fnq_GIJ |
| redundant complexes | 6u8q_M 8fn7_G 8fnd_B 8fng_B 8fnh_B 8fnj_A 8fnl_A 8fnm_J 8fnn_B 8fno_I 8fnp_A 8fnq_A |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence |
No structural evidence for specific binding to DNA (<4 informative columns)
Dendrogram of similar interfaces ?
matrix format------KT--------QT----PAQG--AGECRGQG---- L +----------7u32_A +------------------1 ----RT----------------PATA----QCRG------ L +-2 +----------6voy_C ! ! TGRTYTTTQT--------------QGTT--ECRCQAAATC L --3 +-----------------------------8b4h_A ! ----------YGLIRG--QIII------------------ +-----------------------------2w36_A |
home
updated Tue Dec 19 15:24:31 2023