6v8u_A : 3D-footprint complex

structure name	KAISO (ZBTB33) ZINC FINGER DNA BINDING DOMAIN IN COMPLEX WITH A MODIFIED KAISO BINDING SEQUENCE (KBS) (Transcriptional regulator Kaiso)
reference	Stanfield et al. Biochemistry 59 1909 2020
source	Homo sapiens
experiment	X-ray (resolution=2.10, R-factor=0.175)
structural superfamily	beta-beta-alpha zinc fingers;
sequence family	Zinc finger, C2H2 type;
reference complex	2lt7_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6v8u_A interface=27,28,31,53,55,56,59,81,82,83,115,117, ddhyelivdgrvyyicivckrsyvclTSlrRhfnihswekkypcrycekvfpLaEYrtKheihhtgerryqclacgksfiNYQfmsshiksvhsqdpsgdsklyrlhpcrslqiRqYayl
interface signature	TSRLEYKNYQRY

readout + contact

# IC=8.209 IC/col=1.026 n_of_columns=8

A |  12  12   0   0   0   0   0  96
C |  12  72   0  12   0  96  84   0
G |  12   0  96   0  96   0  12   0
T |  60  12   0  84   0   0   0   0

home
updated Mon Dec 18 18:34:18 2023