6uph_B : 3D-footprint complex

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.

Dendrogram of similar interfaces ?

matrix format

structure name	STRUCTURE OF A YEAST CENTROMERIC NUCLEOSOME AT 2.7 ANGSTROM RESOLUTION
experiment	NMR
structural superfamily	Histone-fold;
sequence family	Core histone H2A/H2B/H3/H4;
multimeric complexes	6uph_ABCDEFGH
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6uph_B interface=22, dniqgitkpairrlarrggvkRisgliyeevrnvlktflesvirdavtytehakrktvtsldvvyalkrqgrtlygfgg

  
  ----RT                                   +1u35_G    
                                         +-1 
  ----RT       +-------------------------2 +7lyb_G    
               !                         ! 
  ----RA       !                         +6t7a_C    
               ! 
  ----RT       !                         +7lya_E    
             --7              +----------3 
  ----RT       !              !          +7zs9_e    
               !         +----5 
  RAET--       !         !    !         +4ne1_p    
               +---------6    +---------4 
  ----RT                 !              +7wlr_E    
                         ! 
  --ITRA                 +---------------7k78_E

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updated Fri Dec 23 01:21:13 2022