6uir_AB : 3D-footprint complex

structure name	HIV-1 M184V REVERSE TRANSCRIPTASE-DNA COMPLEX WITH (-)-FTC-TP
reference	'Commun 2 469 2019 Human immunodeficiency virus type 1 group M subtype B (isolate HXB2)
experiment	X-ray (resolution=2.64, R-factor=?)
structural superfamily	DNA/RNA polymerases;Ribonuclease H-like;
reference complex	6uir_B 7ozw_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6uir_A interface=90,111,145,149,171,344,436,463, pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipiryqynvlpqgwkgsPaifQssmtkilepfrkqnpdiviyqYvddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnrgrqkvvtltdttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdqseselvnqiieqlikkekvylawvpahkgiggneqvdklvsagi > 6uir_B interface= ietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdpaglkkkKsvtvldvgdayfsvpldedfRkytaftipsinnetpgiryqynvlpqgwkgspaIfqsSmtkilepfrkqnpdiviyqyvDdlyvgsdleigqhrtkieelrqhllrwgelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarahtndvkqlteavqkittesIviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq
interface signature	IYPQYRRQ/KRISDI

Estimated binding specificities ?

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# IC=4.094 IC/col=0.256 n_of_columns=16

specificity:

A |   9   2   9  24  24  24  24  24  24  24  24  24  24  24   0   0
C |   9  76  57  24  24  24  24  24  24  24  24  24  24  24  96  96
G |   9   9  21  24  24  24  24  24  24  24  24  24  24  24   0   0
T |  69   9   9  24  24  24  24  24  24  24  24  24  24  24   0   0

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updated Sat Dec 16 19:05:23 2023