6t7a_ABCDEFGHK : 3D-footprint complex

structure name	STRUCTURE OF HUMAN SOX11 TRANSCRIPTION FACTOR IN COMPLEX WITH A NUCLEOSOME
source	HOMO SAPIENS
experiment	NMR
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6t7a_A interface=4,47, kphRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlaaihakrvtimpkdiqlarrirger > 6t7a_B interface=17, krhrkvlrdniqgitkPairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg > 6t7a_C interface=30, kaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk > 6t7a_D interface= krsrkesysvyvykvlkqvhpdtgisskaMgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa > 6t7a_E interface=3, phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvglfedtnlaaihakrvtimpkdiqlarrirger > 6t7a_F interface= krHrkvlrdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg > 6t7a_G interface=30, kaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk > 6t7a_H interface= krsrkesysvyvykvlkqvhpdtgisskaMgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa > 6t7a_K interface= sghikrpmnafmvwskierrkimeqspdmHnaeiskrlgkrwkmlkdsekipfireaerlrlkhmadypdykyrprk
interface signature	RR/P/R/M/R/H/R/M/H

Estimated binding specificities ?

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# IC=1.207 IC/col=0.064 n_of_columns=19

specificity:

A |   9  38  24  24  24  24  24  24  24  24  24  24  24  24  24  24  27  56   9
C |   9  20  24  24  24  24  24  24  24  24  24  24  24  24  24  24  22  13  69
G |  11  19  24  24  24  24  24  24  24  24  24  24  24  24  24  24  25  13   9
T |  67  19  24  24  24  24  24  24  24  24  24  24  24  24  24  24  22  14   9

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updated Wed Nov 30 09:34:13 2022