6ryl_DE : 3D-footprint complex

structure name	WUS-HD BOUND TO TAAT DNA
reference	Sloan et al. 'Nat 11 2223 2020
source	Arabidopsis thaliana
experiment	X-ray (resolution=2.63, R-factor=?)
structural superfamily	Homeodomain-like;
reference complex	6ryd_F
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6ryl_D interface=2,50,53,54, tRwtptteqikilkelyynnairsptadqiqkitarlrqfgkiegknvfYwfQNhkarerqkk > 6ryl_E interface=2,50,53,54, tRwtptteqikilkelyynnairsptadqiqkitarlrqfgkiegknvfYwfQNhkarerqkkr
interface signature	RYQN/RYQN

Estimated binding specificities ?

readout + contact

# IC=11.717 IC/col=0.976 n_of_columns=12

specificity:

A |   0   0  92  96   9   6   0   0   0   0   0  16
C |   0  56   1   0  16   0  90   0   0   0  33   9
G |   4   4   0   0   6  90   6  96   0   0  57   9
T |  92  36   3   0  65   0   0   0  96  96   6  62

scan!

home
updated Sat Dec 16 17:50:07 2023