interface graph thumbnail
legend  pdf

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.


Dendrogram of similar interfaces ?

matrix format
structure nameSTRUCTURE OF INNER KINETOCHORE CCAN-CENP-A COMPLEX
referenceMcLaughlin et al. Nature 574 278 2019
experimentX-ray (resolution=4.15, R-factor=?)
structural superfamilyHistone-fold;
sequence familyCore histone H2A/H2B/H3/H4;
multimeric complexes6qld_NQ 6qld_abdefghi 8ow0_ILT
redundant complexes8ow0
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
  
  --RC                              +--6qld_f    
                            +-------3 
  LTRC                      !       !  +3kwq_E    
                     +------4       +--1 
  LGRA   L           !      !          +8he5_a    
                     !      ! 
  --RT               !      +----------8siy_G    
                 +---6 
  --RA           !   !                 +7xsx_a    
                 !   !  +--------------2 
  --RT         +-7   +--5              +8cww_A    
               ! !      ! 
  --RG         ! !      +--------------7uv9_E    
             +-8 ! 
  LT--       ! ! +---------------------7ywx_E    
           --9 ! 
  LC--       ! +----------------------8bvw_e    
             ! 
  LARG       +-----------------------7unc_a    
           

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updated Tue Dec 19 14:25:11 2023