6q2b_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF PUTATIVE MARR FAMILY TRANSCRIPTIONAL REGULATOR FROM LISTERIA MONOCYTOGENES COMPLEXED WITH 26MER DNA
reference	Midwest Center for Structural Genomics (MCSG)
source	Listeria monocytogenes
experiment	X-ray (resolution=2.72, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	6q2b_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6q2b_A interface=48,58,59,60,63,84, mkdilrdigviaraldsisniefkelnlakgqfiylvricenqgiiqEklvdilkidRTTasRaiknlekngliikkqnknnkKnkllfptekgqqlypliireneysnavalkgfteaeinmltdalkkvkeniaddwlyvkkgnkrsy > 6q2b_B interface=48,58,59,60,62,63,84, mkdilrdigviaraldsisniefkelnlakgqfiylvricenqgiiqEklvdilkidRTTaSRaiknlekngliikkqnknnkKnkllfptekgqqlypliireneysnavalkgfteaeinmltdalkkvkeniaddwlyvkkgnkrsy
interface signature	ERTTRK/ERTTSRK

Estimated binding specificities ?

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# IC=16.789 IC/col=0.839 n_of_columns=20

specificity:

A |  96   0   1  19   7   0  74   0  24  24  24  24   0   0  96  79  11  94  95   0
C |   0   1   4   9  11   0   1  96  24  24  24  24   0  95   0  11  63   0   0   0
G |   0   1   1  65  17   0  21   0  24  24  24  24  96   0   0   5  11   1   1   0
T |   0  94  90   3  61  96   0   0  24  24  24  24   0   1   0   1  11   1   0  96

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updated Sat Dec 16 16:33:11 2023