6pwe_G : 3D-footprint complex

Interface of input file ?

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.

Dendrogram of similar interfaces ?

matrix format

structure name	CRYO-EM STRUCTURE OF NUCLEOSOME CORE PARTICLE
experiment	NMR
structural superfamily	Histone-fold;
sequence family	Core histone H2A/H2B/H3/H4; Histonelike transcription factor CBF/;
multimeric complexes	2nqb_ABCDEFGH 2pyo_ABCDEFGH 4qlc_ABCDEFGHU 4x23_ABCDEFG 4x23_KLMNOPQ 5wcu_ABCDEFGHU 5wcu_KLMNOPQRV 6dzt_ABCDEFGH 6pwe_ABCDEFGH 6pwf_ABCDEFGHK
redundant complexes	6dzt_C 6pwf_C 2nqb 2pyo 4qlc 4x23 5wcu
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6pwe_G interface=3,28, ksRsnraglqfpvgrihrllrkgnyaeRvgagapvylaavmeylaaevlelagnaardnkktriiprhlqlairndeelnkllsgvtiaqggvlpniqavllp

  
  --RC                          +--6qld_f    
                       +--------4 
  LTRC                 !        !  +3kwq_E    
                       !        +--2 
  LGRA   L           +-5           +8he5_a    
                     ! ! 
  --RA               ! !           +7xsx_a    
                 +---6 +-----------1 
  --RG           !   !             +7uv9_E    
                 !   ! 
  LT--         +-7   !           +-7ywx_E    
               ! !   +-----------3 
  --RT         ! !               +-8cww_A    
             +-8 ! 
  LC--       ! ! +-----------------8bvw_e    
           --9 ! 
  LARG       ! +-------------------7unc_a    
             ! 
  --RT       +--------------------8siy_G

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updated Tue Dec 19 14:08:41 2023