interface graph thumbnail
legend  pdf

structure nameDNA N6-ADENINE METHYLTRANSFERASE CCRM IN COMPLEX WITH DOUBLE-STRANDED DNA OLIGONUCLEOTIDE CONTAINING ITS RECOGNITION SEQUENCE GAATC
(Modification methylase CcrMI)
referenceWoodcock et al. 'Nat 10 4600 2019
sourceCaulobacter vibrioides
experimentX-ray (resolution=2.34, R-factor=0.175)
structural superfamilyS-adenosyl-L-methionine-dependent methyltransferases;
sequence familyDNA methylase;
multimeric complexes6pbd_AB
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureDYLQLLRPDVAVWDFYHMPNFKTRELTK

Estimated binding specificities ?

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# IC=7.651 IC/col=1.275 n_of_columns=6 specificity:   
A |   0  96   0   0   0  88
C |   0   0   0   0  96   2
G |  96   0   0   0   0   2
T |   0   0  96  96   0   4
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updated Tue Dec 19 14:03:47 2023