6mg2_AB : 3D-footprint complex

structure name	C-TERMINAL BZIP DOMAIN OF HUMAN C/EBPBETA WITH 16BP METHYLATED OLIGONUCLEOTIDE CONTAINING CONSENSUS RECOGNITION SEQUENCE-C2221 CRYSTAL FORM
reference	Horton et al. 'Nucleic 47 1774 2019
source	Homo sapiens
experiment	X-ray (resolution=1.93, R-factor=?)
structural superfamily	Leucine zipper domain;
reference complex	6mg1_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6mg2_A interface=11,14,17,18,21,22, mkhsdeykirRerNniAVrkSRdkakmrnletqhkvleltaenerlqkkveqlsrelstlrnlfk > 6mg2_B interface=11,14,17,18,21,22, mkhsdeykirRerNniAVrkSRdkakmrnletqhkvleltaenerlqkkveqlsrelstlrnlfkqlpe
interface signature	RNAVSR/RNAVSR

Estimated binding specificities ?

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# IC=5.766 IC/col=0.577 n_of_columns=10

specificity:

A |  54   0   0  24  24  24  24  96  96  16
C |  16   0   0  24  24  24  24   0   0  13
G |  13   0   0  24  24  24  24   0   0  13
T |  13  96  96  24  24  24  24   0   0  54

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updated Sat Dec 16 14:17:21 2023