6l6l_AB : 3D-footprint complex

structure name	STRUCTURAL BASIS OF NR4A2 HOMODIMERS BINDING TO SELECTIVE NUR- RESPONSIVE ELEMENTS
reference	Jiang et al. J.Biol.Chem. 294 19795 2019
source	HOMO SAPIENS
experiment	X-ray (resolution=2.78, R-factor=?)
structural superfamily	Glucocorticoid receptor-like DNA-binding domain;
reference complex	6l6q_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6l6l_A interface=11,20,23,27,28,81, lcavcgdnaaCqhygvrtcEgcKgffKRtvqknakyvclankncpvdkrrrnrcqycrfqkclavgmvkevvrtdslkgrRgrlp > 6l6l_B interface=11,20,23,27,28,81,83, lcavcgdnaaCqhygvrtcEgcKgffKRtvqknakyvclankncpvdkrrrnrcqycrfqkclavgmvkevvrtdslkgrRgRl
interface signature	CEKKRR/CEKKRRR

Estimated binding specificities ?

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# IC=11.410 IC/col=0.634 n_of_columns=18

specificity:

A |  78   0   0  24   0  78  24  24  24  24  24   6   0  78   0   0  24  78
C |   6   0   0  24  96   6  24  24  24  24  24   6   0   6  96  96  24   6
G |   6  96  96  24   0   6  24  24  24  24  24   6  96   6   0   0  24   6
T |   6   0   0  24   0   6  24  24  24  24  24  78   0   6   0   0  24   6

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updated Sat Dec 16 13:34:52 2023