6jrp_GJ : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF CIC-HMG-ETV5-DNA COMPLEX
reference	Song et al. 'Febs 286 4951 2019
source	Homo sapiens
experiment	X-ray (resolution=3.00, R-factor=?)
structural superfamily	HMG-box;
reference complex	6jrp_D
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6jrp_G interface=4,7,9,10,17,28,29,30,33,73, hirRpmNaFMifskrhRalvhqrhpnqDNRtvSkilgewwyalgpkekqkyhdlafqvkeahfkahpdwkwcNk > 6jrp_J interface=4,7,9,10,13,17,28,29,30,33,71,73, hirRpmNaFMifSkrhRalvhqrhpnqDNRtvSkilgewwyalgpkekqkyhdlafqvkeahfkahpdwkWcNk
interface signature	RNFMRDNRSN/RNFMSRDNRSWN

Estimated binding specificities ?

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# IC=14.444 IC/col=1.032 n_of_columns=14

specificity:

A |  88   0   0  96  96  89  67   5   0   3   0   0  96   0
C |   3   0   0   0   0   0   7  19   7  11   0  96   0   7
G |   3   0  96   0   0   7  15  15   7  11   0   0   0   5
T |   2  96   0   0   0   0   7  57  82  71  96   0   0  84

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updated Sat Dec 16 12:18:40 2023