6fb9_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE I-CREI HOMING ENDONUCLEASE D75N VARIANT IN COMPLEX WITH AN ALTERED VERSION OF ITS TARGET DNA AT 5NNN REGION IN THE PRESENCE OF MANGANESE
reference	Molina et al. 'Sci 8 10286 2018
source	Chlamydomonas reinhardtii
experiment	X-ray (resolution=2.95, R-factor=?)
structural superfamily	Homing endonucleases;
reference complex	1t9i_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6fb9_A interface=23,25,27,29,31,32,37,43,45,67,69,72,138,139, ntkynkefllylagfvdgdgsiIaQiKpNqSYkfkhQlsltfQvTqktqrrwfldklvdeigvgyvRdRgsVsnyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravldaa > 6fb9_B interface=21,23,25,27,29,31,32,37,43,45,67,69,72, ntkynkefllylagfvdgdgSiIaQiKpNqSYkfkhQlsltfQvTqktqrrwfldklvdeigvgyvRdRgsVsnyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsktrkttsetvravlda
interface signature	IQKNSYQQTRRVKT/SIQKNSYQQTRRV

Estimated binding specificities ?

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# IC=25.351 IC/col=1.056 n_of_columns=24

specificity:

A |   6   0  96  96  84  96   0   0   0   0  10  24  24   3   3  96   0   0   0   3   0   0   0  84
C |   3  96   0   0   3   0  96   0   0  93   7  24  24  76   3   0  96   0   0   6   0   0   0   3
G |   3   0   0   0   6   0   0   0  96   3  72  24  24  10  84   0   0  96   0   3   0   0  96   6
T |  84   0   0   0   3   0   0  96   0   0   7  24  24   7   6   0   0   0  96  84  96  96   0   3

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updated Sat Dec 16 10:24:42 2023