6fb8_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE I-CREI HOMING ENDONUCLEASE D75N VARIANT IN COMPLEX WITH AN ALTERED VERSION OF ITS TARGET DNA AT 5NNN REGION IN THE PRESENCE OF MAGNESIUM
reference	Molina et al. 'Sci 8 10286 2018
source	Chlamydomonas reinhardtii
experiment	X-ray (resolution=2.45, R-factor=?)
structural superfamily	Homing endonucleases;
reference complex	1t9i_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6fb8_A interface=21,23,25,27,29,31,32,37,43,45,67,69,72,74,138,139, ntkynkefllylagfvdgdgSiIaQiKpNqSYkfkhQlsltfQvTqktqrrwfldklvdeigvgyvRdRgsVsNyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravldaa > 6fb8_B interface=21,23,25,27,29,31,32,37,39,43,45,67,69,72,74,138,139, ntkynkefllylagfvdgdgSiIaQiKpNqSYkfkhQlSltfQvTqktqrrwfldklvdeigvgyvRdRgsVsNyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravlda
interface signature	SIQKNSYQQTRRVNKT/SIQKNSYQSQTRRVNKT

Estimated binding specificities ?

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# IC=27.234 IC/col=1.135 n_of_columns=24

specificity:

A |   0   4  96  96  79  96   2   0   2   7  93   1  92   7   0   0  93   3   0   2   0   0   4  94
C |   2  88   0   0   3   0  88   0   2  81   1   2   2  83   0  93   1   0   0   4   0   0   2   0
G |   3   2   0   0   7   0   2  96   4   4   2   2   2   2  96   1   0  93   0   4   0   0  88   0
T |  91   2   0   0   7   0   4   0  88   4   0  91   0   4   0   2   2   0  96  86  96  96   2   2

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updated Sat Dec 16 10:24:24 2023