6fb7_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE I-CREI HOMING ENDONUCLEASE D75N VARIANT IN COMPLEX WITH ITS TARGET DNA IN THE PRESENCE OF MANGANESE
reference	Molina et al. 'Sci 8 10286 2018
source	Chlamydomonas reinhardtii
experiment	X-ray (resolution=2.69, R-factor=?)
structural superfamily	Homing endonucleases;
reference complex	1t9i_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6fb7_A interface=21,23,25,27,29,31,32,37,39,43,45,67,69,72,74,139, ntkynkefllylagfvdgdgSiIaQiKpNqSYkfkhQlSltfQvTqktqrrwfldklvdeigvgyvRdRgsVsNyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndskTrkttsetvravld > 6fb7_B interface=21,23,25,27,29,31,32,37,39,43,45,67,69,72,74,138,139, ntkynkefllylagfvdgdgSiIaQiKpNqSYkfkhQlSltfQvTqktqrrwfldklvdeigvgyvRdRgsVsNyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld
interface signature	SIQKNSYQSQTRRVNT/SIQKNSYQSQTRRVNKT

Estimated binding specificities ?

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# IC=25.263 IC/col=1.098 n_of_columns=23

specificity:

A |   0  96  96  81  96   0  15   0   1  12   0  55   5   0  96   0  19   0  75   0   0   0  95
C |  96   0   0   0   0  89   0   0  94   5   0   6  83   0   0  59   3   0   5   0   0   0   0
G |   0   0   0  15   0   0  80   0   0  72   0   3   3  96   0   0  74   0   1   0   0  96   1
T |   0   0   0   0   0   7   1  96   1   7  96  32   5   0   0  37   0  96  15  96  96   0   0

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updated Sat Dec 16 10:24:09 2023