6f58_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF HUMAN BRACHYURY (T) IN COMPLEX WITH DNA
reference	Burgess-Brown et al. 'To ? ? ?
source	Homo sapiens
experiment	X-ray (resolution=2.25, R-factor=?)
structural superfamily	p53-like transcription factors;
reference complex	6f59_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6f58_A interface=30,151,152,168,172, gelrvgleeselwlrfkeltnemivtkngRrmfpvlkvnvsgldpnamysflldfvaadnhrwkyvngewvpgapscvyihpdspnfgahwmkapvsfskvkltnklngggqimlnslhkyeprihivrvggpqrmitshcfpetqfiavTAyqneeitalkikynpFakaFldakersh > 6f58_B interface=30,151,152,168,172, gelrvgleeselwlrfkeltnemivtkngRrmfpvlkvnvsgldpnamysflldfvaadnhrwkyvngewvpgapscvyihpdspnfgahwmkapvsfskvkltnklngggqimlnslhkyeprihivrvggpqrmitshcfpetqfiavTAyqneeitalkikynpFakaFlda
interface signature	RTAFF/RTAFF

Estimated binding specificities ?

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# IC=9.302 IC/col=0.517 n_of_columns=18

specificity:

A |   6  24  24  24   0  96  14   7  24  84  24   3   6   0  24  24  24  87
C |   3  24  24  24  96   0  72  72  24   6  24   6   3   0  24  24  24   3
G |   3  24  24  24   0   0   3  10  24   3  24  76   3  96  24  24  24   3
T |  84  24  24  24   0   0   7   7  24   3  24  11  84   0  24  24  24   3

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updated Sat Dec 16 10:22:10 2023