interface graph thumbnail
legend  pdf

structure nameSTRUCTURE OF THE TN1549 TRANSPOSON INTEGRASE (AA 82-397, R225K) IN COMPLEX WITH CIRCULAR INTERMEDIATE DNA (CI5-DNA)
(Int protein)
referenceRubio-Cosials et al. Cell 173 208 2018
sourceEnterococcus faecalis
experimentX-ray (resolution=2.79, R-factor=0.199)
structural superfamilyDNA breaking-rejoining enzymes;
sequence familyPhage integrase family;
multimeric complexes6emz_AB 6en0_AB 6en1_AB 6en2_AB
reference complex6en1_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureNTRKTNRSYTAVDRN

Estimated binding specificities ?

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# IC=9.868 IC/col=0.822 n_of_columns=12 specificity:   
A |   0  96  96  96  96  14  11  69  10  64  24   0
C |   0   0   0   0   0   9  12  11  11   8  24   0
G |  96   0   0   0   0  14  11   8  11  11  24  96
T |   0   0   0   0   0  59  62   8  64  13  24   0
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updated Mon Dec 18 14:59:23 2023