interface graph thumbnail
legend  pdf

structure nameCRYO-EM STRUCTURE OF RAG IN COMPLEX WITH 12-RSS AND 23-RSS SUBSTRATE DNAS
referenceLiao et al. 'Nat. 25 732 2018
sourceDANIO RERIO / ESCHERICHIA COLI, DANIO RERIO
experimentX-ray (resolution=4.29, R-factor=?)
structural superfamilyGalactose oxidase, central domain;
reference complex6dbj_A 6dbj_D
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureN/RRAHHRQ

Estimated binding specificities ?

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# IC=8.472 IC/col=0.368 n_of_columns=23 specificity:   
A |   0  96   0  24  24  24  24  24  24  24  24  24  24  24  24  24  24  57   0  96  24  54  96
C |  96   0   0  24  24  24  24  24  24  24  24  24  24  24  24  24  24  13  96   0  24  16   0
G |   0   0  96  24  24  24  24  24  24  24  24  24  24  24  24  24  24  13   0   0  24  13   0
T |   0   0   0  24  24  24  24  24  24  24  24  24  24  24  24  24  24  13   0   0  24  13   0
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updated Sat Dec 16 09:08:10 2023