interface graph thumbnail
legend  pdf

structure nameMBD2 IN COMPLEX WITH METHYLATED DNA
referenceStructural Genomics Consortium (SGC)
sourceHomo sapiens
experimentX-ray (resolution=2.05, R-factor=?)
structural superfamilyDNA-binding domain;
reference complex6c1t_D
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRSDYR/RDYR

Estimated binding specificities ?

readout + contactlogo
# IC=5.931 IC/col=0.847 n_of_columns=7 specificity:   
A |   0   0  25  51  51   0   0
C |  96   0  12  19   7   0   0
G |   0  96  47  20  19   0  96
T |   0   0  12   6  19  96   0
scan!

home
updated Sat Dec 16 08:36:15 2023