6b1s_AB : 3D-footprint complex

structure name	HYDROGEN BONDING COMPLEMENTARY, NOT SIZE COMPLEMENTARITY IS KEY IN THE FORMATION OF THE DOUBLE HELIX
reference	Georgiadis et al. 'J. 140 11655 2018
source	Moloney murine leukemia virus
experiment	X-ray (resolution=2.00, R-factor=?)
structural superfamily	DNA/RNA polymerases;
reference complex	6mih_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6b1s_A interface=41,76,81,83,85, twlsdfpqawaetggmglavrqapliiplkatstpvsikqYpmsqearlgikphiqrlldqgilvpcqspwntplLpvrpVqDlRevnkrvedihptvpnpynllsglppshqwytvldlkdaffclrlhptsqplfafewrdpgisgqltwtrlpqgfknsptlfdealhrdladfriqhpdlillqyvddlllaatseldcqqgtrallqtlgnlgyrasakkaqicqkqvkylgyllkegqr > 6b1s_B interface=41,76,77,82,84,86, twlsdfpqawaetggmglavrqapliiplkatstpvsikqYpmsqearlgikphiqrlldqgilvpcqspwntplLPvyrpVqDlRevnkrvedihptvpnpynllsglppshqwytvldlkdaffclrlhptsqplfafewrdpemsgqltwtrlpqgfknsptlfdealhrdladfriqhpdlillqyvddlllaatseldcqqgtrallqtlgnlgyrasakkaqicqkqvkylgyllkegqr
interface signature	YLVDR/YLPVDR

Estimated binding specificities ?

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# IC=3.180 IC/col=0.199 n_of_columns=16

specificity:

A |   0  14  20  24  24  24  24  24  24  24  24  24  24  34  56   0
C |  96  14  20  24  24  24  24  24  24  24  24  24  24  22  13   0
G |   0  14  22  24  24  24  24  24  24  24  24  24  24  20  13  96
T |   0  54  34  24  24  24  24  24  24  24  24  24  24  20  14   0

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updated Sat Dec 16 08:18:55 2023