6b0r_A : 3D-footprint complex

structure name	ZINC FINGER DOMAIN OF WT1(-KTS FORM) WITH M342R MUTATION AND 14+1MER OLIGONUCLEOTIDE WITH 3' TRIPLET TGG (Wilms tumor protein)
reference	Horton et al. 'Nucleic 46 3864 2018
source	Homo sapiens
experiment	X-ray (resolution=1.82, R-factor=0.209)
structural superfamily	beta-beta-alpha zinc fingers;
sequence family	Zinc finger, C2H2 type;
reference complex	2jpa_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6b0r_A interface=18,20,21,24,48,50,51,54,76,77,78,79,82,106,108,109,112, hmrpfmcaypgcnkryfKlSHlqRhsrkhtgekpyqcdfkdcerrfsRsDQlkRhqrrhtgvkpfqcktcqrkfsRSDHlkThtrthtgekpfscrwpscqkkfaRsDElvRhhnmhq
interface signature	KSHRRDQRRSDHTRDER

Estimated binding specificities ?

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# IC=12.121 IC/col=1.102 n_of_columns=11

specificity:

A |   0   0   0  10   0   0   0  64   0  10   0
C |  96  96  96  10  96  96  96  10  96  12  96
G |   0   0   0   0   0   0   0  12   0  64   0
T |   0   0   0  76   0   0   0  10   0  10   0

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updated Mon Dec 18 14:29:09 2023