6amk_AB : 3D-footprint complex

structure name	STRUCTURE OF STREPTOMYCES VENEZUELAE BLDC-WHII OPT COMPLEX
reference	'Nat 9 1139 2018 X-RAY DIFFRACTION
source	Streptomyces venezuelae
experiment	X-ray (resolution=3.29, R-factor=?)
structural superfamily	Putative DNA-binding domain;
reference complex	6amk_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6amk_A interface=18,22,38, pplltpaevatmfrvdpKtvtRwakagkltsirtmggHrryreaevralmag > 6amk_B interface=15,17,21,37, plltpaevatmfrvDpKtvtRwakagkltsirtmggHrryreaevralmag
interface signature	KRH/DKRH

Estimated binding specificities ?

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# IC=9.617 IC/col=0.687 n_of_columns=14

specificity:

A |   3   0   3   0   3  24  24  24  24   3  14  11   0  76
C |   3   0   3  96  84  24  24  24  24   3   3  76  96  11
G |   3  96   6   0   3  24  24  24  24   3  76   6   0   6
T |  87   0  84   0   6  24  24  24  24  87   3   3   0   3

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updated Sat Dec 16 08:09:56 2023