interface graph thumbnail
legend  pdf

structure nameCAULOBACTER CRESCENTUS GCRA DNA-BINDING DOMAIN (DBD) IN COMPLEX WITH METHYLATED DSDNA (CRYSTAL FORM 2)
referenceZhang et al. 'Nucleic 46 3245 2018
sourceCaulobacter crescentus (strain NA1000 / CB15N) / Caulobacter crescentus (strain NA1000 / CB15N) / Caulobacter crescentus (strain NA1000 / CB15N) / Caulobacter crescentus (strain NA1000 / CB15N)
experimentX-ray (resolution=1.55, R-factor=?)
structural superfamilypost-AAA+ oligomerization domain-like;
reference complex5yiw_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRNIHR/K

Estimated binding specificities ?

readout + contactlogo
# IC=5.131 IC/col=0.733 n_of_columns=7 specificity:   
A |   8  11  24  96   8   0  87
C |  69   8  24   0  11  96   0
G |  11  69  24   0   8   0   0
T |   8   8  24   0  69   0   9
scan!

home
updated Sat Dec 16 07:38:55 2023