interface graph thumbnail
legend  pdf

structure nameTRANSCRIPTION FACTOR FOSB/JUND BZIP DOMAIN IN COMPLEX WITH COGNATE DNA, TYPE-II CRYSTAL
(TRANSCRIPTION FACTOR JUN-D)
referenceRudenko et al. 'Nucleic 45 11425 2017
sourceHOMO SAPIENS
experimentX-ray (resolution=2.69, R-factor=0.213)
structural superfamilyLeucine zipper domain;A DNA-binding domain in eukaryotic transcription factors;
sequence familybZIP transcription factor; Basic region leucine zipper;
reference complex5vpe_D
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureNAACR

Estimated binding specificities ?

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# IC=3.968 IC/col=0.794 n_of_columns=5 specificity:   
A |  11   9  96   9   0
C |   9   9   0   9   0
G |   9  67   0  67   0
T |  67  11   0  11  96
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updated Mon Dec 18 13:45:01 2023