5uan_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF MULTI-DOMAIN RAR-BETA-RXR-ALPHA HETERODIMER ON DNA
reference	Rastinejad et al. 'Nat 8 868 2017
source	HOMO SAPIENS
experiment	X-ray (resolution=3.51, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5uan_A interface=21,24,28,29, hicaicgdrssgkhygvyscEgcKgffKRtvrkdclidkrqrncqycryqkclamgmkreavqeeranedmpverileaelavepvtnicqaadkqlftlvewakriphfselplddqvillragwnelliasfshrsiavkdgillatglhvhrnsahsagvgaifdrvltelvskmrdmqmdktelgclraivlfnpdskglsnpaevealrekvyasleayckhkypeqpgrfaklllrlpalrsiglkclehlfffkligdtpidtflmemlea > 5uan_B interface=20,23,27,28, pcfvcqdkssgyhygvsacEgcKgffRRsiqknmiytchrdkncvinkvtrnrcqycrlqkcfevgmskesvrtaelddltekirkahqetfpslcqlgkyttnssadhrvrldlglwdkfselatkciikivefakrlpgftgltiadqitllkaacldililrictrytpeqdtmtfsdgltlnrtqmhnagfgpltdlvftfanqllplemddtetgllsaiclicgdrqdleeptkvdklqepllealkiyirkrrpskphmfpkilmkitdlrsisakgaervitlkmeipgsmppliqemle
interface signature	EKKR/EKRR

Estimated binding specificities ?

readout + contact

# IC=7.626 IC/col=0.693 n_of_columns=11

specificity:

A |   7  24   0   1  24  24   7   0  66   0   0
C |   7  24  96  88  24  24  14   0  14  96  96
G |  22  24   0   0  24  24   7  96   7   0   0
T |  60  24   0   7  24  24  68   0   9   0   0

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updated Sat Dec 16 06:02:21 2023