5t7x_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF HHV-4 EBNA1 DNA BINDING DOMAIN (PATIENT-DERIVED, NASOPHARYNGEAL CARCINOMA) BOUND TO DNA
reference	Lieberman et al. Oncotarget 8 7248 2017
source	Human herpesvirus 4 (strain B95-8) / Human herpesvirus 4 (strain B95-8) / Human herpesvirus 4 (strain B95-8) / Human herpesvirus 4 (strain B95-8)
experiment	X-ray (resolution=2.35, R-factor=?)
structural superfamily	Viral DNA-binding domain;
reference complex	5t7x_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5t7x_A interface=4,5,9,17,18,54,55,58,59,62, kggWFgkhRgqggsnpKFeniaeglrvllarshvertteegnwvagvfvyggsKTslYNlrRgialavpqcritplsrlpfgmapgpgpqpgplresivcyfmvflqthifaevlkdaikdlvmikpaptcnikvtvcsfddgvdlp > 5t7x_B interface=3,6,7,19,56,57,60,61,64, rkKggWFgkhrgqggsnpKfeniaeglrvllarshvertteegnwvagvfvyggsKTslYNlrRgialavpqcritplsrlpfgmapgpgpqpgplresivcyfmvflqthifaevlkdaikdlvmikpaptcnikvtvcsfddgvdlp
interface signature	WFRKFKTYNR/KWFKKTYNR

Estimated binding specificities ?

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# IC=15.602 IC/col=0.867 n_of_columns=18

specificity:

A |   0   0  96   0  93   8   0  24  24  24  13   3  11   2  89   0   0   0
C |   0   0   0   2   1   6  82  24  24  24   8   2  64   3   2  96  96  96
G |  96  96   0   0   0  69   3  24  24  24  11  89  11   2   2   0   0   0
T |   0   0   0  94   2  13  11  24  24  24  64   2  10  89   3   0   0   0

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updated Sat Dec 16 05:46:12 2023