5t01_AB : 3D-footprint complex

structure name	HUMAN C-JUN DNA BINDING DOMAIN HOMODIMER IN COMPLEX WITH METHYLATED DNA
reference	Horton et al. 'Nucleic 45 2503 2017
source	Homo sapiens
experiment	X-ray (resolution=1.89, R-factor=?)
structural superfamily	Leucine zipper domain;A DNA-binding domain in eukaryotic transcription factors;
reference complex	5t01_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5t01_A interface=7,11,15,19, hmkaerKrmrNriaAsksRkrkleriarleekvktlkaqnselastanmlreqvaqlkqkvm > 5t01_B interface=11,14,15,19, hmkaerkrmrNriAAsksRkrkleriarleekvktlkaqnselastanmlreqvaqlkqkvm
interface signature	KNAR/NAAR

Estimated binding specificities ?

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# IC=7.273 IC/col=0.808 n_of_columns=9

specificity:

A |  54  24  20  96   0   0   0  96  13
C |  16  24  13   0   0   0  96   0  13
G |  13  24  50   0  96   0   0   0  16
T |  13  24  13   0   0  96   0   0  54

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updated Sat Dec 16 05:45:05 2023