interface graph thumbnail
legend  pdf

structure nameMOBM RELAXASE DOMAIN (MOBV; MOB_PRE) BOUND TO 26NT PMV158 ORIT DNA
(PLASMID RECOMBINATION ENZYME)
referenceBoer et al. 'Proc. 114 E6526 2017
sourceSTREPTOCOCCUS AGALACTIAE
experimentX-ray (resolution=2.00, R-factor=0.170)
sequence familyPlasmid recombination enzyme;
reference complex4lvi_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKRRK

Estimated binding specificities ?

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# IC=5.053 IC/col=0.842 n_of_columns=6 specificity:   
A |  64   0   0   8  16  96
C |   8  96   0   8   8   0
G |  16   0   8   8   8   0
T |   8   0  88  72  64   0
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updated Mon Dec 18 13:20:13 2023