interface graph thumbnail
legend  pdf

structure nameICP4 DNA-BINDING DOMAIN IN COMPLEX WITH 19MER DNA DUPLEX FROM ITS OWN PROMOTER
(RS1)
referenceLockhart-Cairns et al. 'Nucleic 45 8064 2017
sourceHUMAN HERPESVIRUS 1
experimentX-ray (resolution=2.28, R-factor=0.213)
sequence familyHerpesvirus ICP4like protein Ntermina;
multimeric complexes5mhk_AB 5mhk_CDJ
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureNSSRR

Estimated binding specificities ?

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# IC=3.101 IC/col=0.775 n_of_columns=4 specificity:   
A |  54   0   0  54
C |  13  96   0  16
G |  13   0  96  13
T |  16   0   0  13
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updated Thu Dec 22 21:51:11 2022