5k58_ABEF : 3D-footprint complex

structure name	STRUCTURE OF THE K. PNEUMONIA SLMA-DNA COMPLEX BOUND TO THE C- TERMINAL OF THE CELL DIVISION PROTEIN FTSZ
reference	'Proc. 113 4988 2016 X-RAY DIFFRACTION
source	Escherichia coli O139:H28 (strain E24377A / ETEC) / Escherichia coli O139:H28 (strain E24377A / ETEC) / Escherichia coli O139:H28 (strain E24377A / ETEC) / Escherichia coli O139:H28 (strain E24377A / ETEC) / Escherichia coli O139:H28 (strain E24377A / ETEC) / Escherichia coli O139:H28 (strain E24377A / ETEC) / Escherichia coli O139:H28 (strain E24377A / ETEC) / Escherichia coli O139:H28 (strain E24377A / ETEC)
experiment	X-ray (resolution=2.77, R-factor=?)
structural superfamily	Homeodomain-like;Tetracyclin repressor-like, C-terminal domain;
reference complex	4gck_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5k58_A interface=26,36,37,38,39,41,42, rnrreeilqslalmlessdgsqritTaklaasvgvSEAAlYRhfpsktrmfdsliefiedslitrinlilkdekdttarlrlivllllgfgernpgltriltghalmfeqdrlqgrinqlferieaqlrqvmrekrmregegyttdetllasqilafcegmlsrfvrsefkyrptddfdarwpliaaqlq > 5k58_B interface=25,36,40, nrreeilqslalmlessdgsqritTaklaasvgvsEaalYrhfpsktrmfdsliefiedslitrinlilkdekdttarlrlivllllgfgernpgltriltghalmfeqdrlqgrinqlferieaqlrqvmrekrmregegyttdetllasqilafcegmlsrfvrsefkyrptddfdarwpliaaqlq > 5k58_E interface=26,37,38,39,41,42, rnrreeilqslalmlessdgsqritTaklaasvgvsEAAlYRhfpsktrmfdsliefiedslitrinlilkdekdttarlrlivllllgfgernpgltriltghalmfeqdrlqgrinqlferieaqlrqvmrekrmregegyttdetllasqilafcegmlsrfvrsefkyrptddfdarwpliaaqlq > 5k58_F interface=25,36,40, nrreeilqslalmlessdgsqritTaklaasvgvsEaalYrhfpsktrmfdsliefiedslitrinlilkdekdttarlrlivllllgfgernpgltriltghalmfeqdrlqgrinqlferieaqlrqvmrekrmregegyttdetllasqilafcegmlsrfvrsefkyrptddfdarwpliaaqlq
interface signature	TSEAAYR/TEY/TEAAYR/TEY

Estimated binding specificities ?

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# IC=11.161 IC/col=0.930 n_of_columns=12

specificity:

A |   0   0  24  79   0  12  84   0   5  11  96   0
C |   0   0  24   5   0  11   5  96   5  69   0  96
G |  96   0  24   5  96  11   5   0   5   5   0   0
T |   0  96  24   7   0  62   2   0  81  11   0   0

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updated Sat Dec 16 03:05:56 2023