interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF THE DNA BINDING DOMAIN OF TRANSCRIPTION FACTOR FLI1 IN COMPLEX WITH AN 11-MER DNA GACCGGAAGTG
(Friend leukemia integration 1 transcription factor)
referenceTsodikov et al. 'Nucleic 44 8990 2016
sourceHomo sapiens
experimentX-ray (resolution=3.10, R-factor=0.196)
structural superfamily"Winged helix" DNA-binding domain;
sequence familyEtsdomain;
multimeric complexes5jvt_AD 6vg8_AD 6vgd_AD 6vge_AD 6vgg_AD
reference complex4iri_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureDKRARYK

Estimated binding specificities ?

contactlogo
# IC=4.039 IC/col=0.808 n_of_columns=5 specificity:   
A |  10   2   0   0  10
C |  12  10  96  96  12
G |  10  10   0   0  64
T |  64  74   0   0  10
scan!

home
updated Mon Dec 18 13:07:31 2023