structure nameHUMAN CORE-PIC IN THE INITIAL TRANSCRIBING STATE (NO IIS)
sourceHOMO SAPIENS
experimentNMR
structural superfamilyCyclin-like;Zinc beta-ribbon;Transcription factor IIA TFIIA, beta-barrel domain;Transcription factor IIA TFIIA, alpha-helical domain;TATA-box binding protein-like;Rap30/74 interaction domains;"Winged helix" DNA-binding domain;
reference complex5iy6_M 5iy6_N 5iy6_P 5iy6_T
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRTARH/KYRKQIKHK/R/RFNATNTSRNK/EELEDFRIKDW/NVFLFVNVFPLFVT/KIH

Estimated binding specificities ?

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# IC=31.822 IC/col=0.816 n_of_columns=39 specificity:   
A |   0   0   0  24   0  79   2  24   0  96   0  24  81   2  24  96  96   0   0  24   0   0   5  24  24  24  24  24  24  24   5   2   2   2   0   0  87   0  96
C |   0  96   0  24   0   7  87  24   0   0   0  24   5  87  24   0   0  96   0  24   0  96  87  24  24  24  24  24  24  24  78  90   2   2   0   0   5   0   0
G |   0   0  96  24  96   5   2  24  96   0  96  24   5   5  24   0   0   0  96  24  96   0   2  24  24  24  24  24  24  24   8   2   2   2   0   0   2   0   0
T |  96   0   0  24   0   5   5  24   0   0   0  24   5   2  24   0   0   0   0  24   0   0   2  24  24  24  24  24  24  24   5   2  90  90  96  96   2  96   0
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updated Sat Dec 16 02:50:02 2023