structure nameHUMAN CORE-PIC IN THE INITIAL TRANSCRIBING STATE
sourceHOMO SAPIENS
experimentNMR
structural superfamilyCyclin-like;Zinc beta-ribbon;Transcription factor IIA TFIIA, beta-barrel domain;Transcription factor IIA TFIIA, alpha-helical domain;TATA-box binding protein-like;Rap30/74 interaction domains;"Winged helix" DNA-binding domain;
reference complex5iy6_M 5iy6_N 5iy6_P 5iy6_T
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureMKTR/WYKYKKQIKR//RFSNASNKNRTRNK/EEPLEEFHLGRKDW/NVFLFVTNFPLFVT/KIH

Estimated binding specificities ?

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# IC=32.504 IC/col=0.855 n_of_columns=38 specificity:   
A |   0   0  24   2  96   2   0   4  96   4  24  96   6  10  94  96   0   0   0   5   0   0  24  24  24  24  24  24  24  24   0   0   5   0   0  96   0  80
C |  96   0  24   2   0  88   1   2   0   2  24   0  83  11   0   0  96   0  96   5  96  96  24  24  24  24  24  24  24  24  96   0   5   0   0   0   0   6
G |   0  96  24  88   0   2   2  88   0  88  24   0   2  65   0   0   0  96   0  80   0   0  24  24  24  24  24  24  24  24   0   0   5   0   0   0   0   5
T |   0   0  24   4   0   4  93   2   0   2  24   0   5  10   2   0   0   0   0   6   0   0  24  24  24  24  24  24  24  24   0  96  81  96  96   0  96   5
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updated Sat Dec 16 02:45:12 2023