structure nameHUMAN HOLO-PIC IN THE OPEN STATE
sourceHOMO SAPIENS
experimentNMR
structural superfamilyCyclin-like;Zinc beta-ribbon;Transcription factor IIA TFIIA, beta-barrel domain;Transcription factor IIA TFIIA, alpha-helical domain;TATA-box binding protein-like;Rap30/74 interaction domains;"Winged helix" DNA-binding domain;P-loop containing nucleoside triphosphate hydrolases;
reference complex5iy6_M 5iy6_N 5iy6_P 5iy6_T 5iy6_V
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKKR/YKDH//SNDKATRDSQKNSKNRTMRM/PLNSEDEQELHDGILNRDKG/NVFLFVTNVFPLFVT/KH/L

Estimated binding specificities ?

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# IC=26.175 IC/col=0.748 n_of_columns=35 specificity:   
A |  96   0  96  96  92  96   0  24  24  24  24  24  24  24  24  10   0   0  10   0   5  96  96  10   0   0   0   6  24   0  24   0  24  24   3
C |   0   0   0   0   0   0   0  24  24  24  24  24  24  24  24  10   0  96  10  96   3   0   0  10   0   0   0   6  24   0  24   0  24  24   3
G |   0   0   0   0   1   0  96  24  24  24  24  24  24  24  24  68  96   0  65   0  85   0   0  11   0   0   0   6  24   0  24   0  24  24  85
T |   0  96   0   0   3   0   0  24  24  24  24  24  24  24  24   8   0   0  11   0   3   0   0  65  96  96  96  78  24  96  24  96  24  24   5
scan!

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updated Sat Dec 16 02:21:40 2023