interface graph thumbnail
legend  pdf

structure nameMOUSE TDP2 REACTION PRODUCT (5'-PHOSPHORYLATED DNA)-MG2+ COMPLEX WITH 1-N6-ETHENO-ADENINE
(TYROSYL-DNA PHOSPHODIESTERASE 2)
referenceSchellenberg et al. 'Nucleic 44 3829 2016
sourceMUS MUSCULUS
experimentX-ray (resolution=1.43, R-factor=0.118)
structural superfamilyDNase I-like;
sequence familyEndonuclease/Exonuclease/phosphatase fa;
multimeric complexes4gz0_AG 4gz0_BI 4gz0_EK 4gz1_AB 4gz2_AB 5ht2_AB 5ink_AB 5inl_AB 5inp_AB 5inq_AB 5tvp_AB 5tvp_EI 5tvp_GO 5tvp_KM
redundant complexes4gz0_G 4gz1_A 4gz2_B 5ink_B 5inl_A 5inp_B 5inq_A 5tvp
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence

No structural evidence for specific binding to DNA (<4 informative columns)


Dendrogram of similar interfaces ?

matrix format
  
  --------WC--ICPGAGYC                                +5ht2_B    
                                             +--------1 
  DCLC------LCIG--AG--       +---------------2        +5ino_A    
                             !               ! 
  ----NA--------PTHA--   L --3               +--------7n8s_A    
                             ! 
  ------KG------------       +------------------------7dpe_A    
                           

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updated Tue Dec 19 10:36:30 2023