5hoo_A : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE MOS1 STRAND TRANSFER COMPLEX (Mariner Mos1 transposase)
reference	Richardson et al. Elife 5 ? 2016
source	Drosophila mauritiana
experiment	X-ray (resolution=3.30, R-factor=0.234)
structural superfamily	"Winged helix" DNA-binding domain;
sequence family	Transposase;
reference complex	4u7b_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5hoo_A interface=42,45,46,63,66,97,98,99,100,102, sfvpnkeqtrtvlifcfhlkktaaeshrmlveafgeqvptvKtcERwfqrfksgdfdvddkeHgkPpkryedaelqalldeddaqtqkqlaeqlevSQQAvSnrlremgkiqkvgrwvphelnerqmerrkntceillsrykrksflhrivtgdekwiffvnpkrkksyvdpgqpatstarpnrfgkktmlcvwwdqsgviyyellkpgetvnaaryqqqlinlnralqrkrrviflhdnapshtaravrdtletlnwevlphaayspdlapsdyhlfasmghalaeqrfdsyesvkkwldewfaakddefywrgihklperwekcvasdgkyfe
interface signature	KERHPSQQAS

Estimated binding specificities ?

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# IC=11.764 IC/col=0.654 n_of_columns=18

specificity:

A |   3   0  65   0  96  24  24  24  14  69   7  24  24  24   0   0   0  87
C |  88   0  14  96   0  24  24  24  60   7  14  24  24  24   0   0   0   3
G |   5  96  14   0   0  24  24  24  12  10   3  24  24  24   0  96   0   3
T |   0   0   3   0   0  24  24  24  10  10  72  24  24  24  96   0  96   3

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updated Mon Dec 18 12:53:43 2023