5g34_AB : 3D-footprint complex

structure name	STRUCTURE OF RAD14 IN COMPLEX WITH ACETYLAMINOANTHRACENE-C8-GUANINE CONTAINING DNA
reference	Schneider et al. Chemistry 22 10782 2016
source	SACCHAROMYCES CEREVISIAE
experiment	X-ray (resolution=1.90, R-factor=?)
structural superfamily	Putative DNA-binding domain;
reference complex	5a3d_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5g34_A interface=43,44,46,47,53,69,71,75, apkciechiniemdpvlhdvfklqvckqcskehpekyalltkTEcKEdyfltDpelndedlfhrlekpNpHsgtFarmqlfvrceveafafkkwggeegldeewqrreegkahr > 5g34_B interface=43,53,69,71,75, apkciechiniemdpvlhdvfklqvckqcskehpekyalltkTeckedyfltDpelndedlfhrlekpNpHsgtFarmqlfvrceveafafkkwggeegldeewqrreegkahr
interface signature	TEKEDNHF/TDNHF

Estimated binding specificities ?

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# IC=4.452 IC/col=0.342 n_of_columns=13

specificity:

A |   0  24  24  18  24  24  24  24  18  24  18  96   0
C |   0  24  24  18  24  24  24  24  18  24  12   0   0
G |   0  24  24  12  24  24  24  24  18  24  54   0  96
T |  96  24  24  48  24  24  24  24  42  24  12   0   0

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updated Sat Dec 16 01:26:01 2023