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structure nameHUMAN PRDM9 ALLELE-A ZNF DOMAIN WITH ASSOCIATED RECOMBINATION HOTSPOT DNA SEQUENCE II
(Histone-lysine N-methyltransferase PRDM9)
referenceHorton et al. 'Genes 30 257 2016
sourceHomo sapiens
experimentX-ray (resolution=1.98, R-factor=0.194)
structural superfamilybeta-beta-alpha zinc fingers;
sequence familyZinc finger, C2H2 type;
reference complex5ei9_F
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureSNSHRDSHRRRDSNNKSHR

Estimated binding specificities ?

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# IC=15.265 IC/col=1.174 n_of_columns=13 specificity:   
A |  16   0   0   0   0  96   0   0   0  80   0   0   0
C |  16   0   0  96  16   0   0   0   0  16   0   0  96
G |  16  96  96   0   0   0  96  96  96   0  96  96   0
T |  48   0   0   0  80   0   0   0   0   0   0   0   0
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updated Mon Dec 18 12:38:18 2023