5edn_AJ : 3D-footprint complex

structure name	STRUCTURE OF HOXB13-DNA(TCG) COMPLEX
reference	Morgunova et al. Elife 7 ? 2018
source	Homo sapiens
experiment	X-ray (resolution=3.20, R-factor=?)
structural superfamily	Homeodomain-like;
reference complex	7psx_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5edn_A interface=1,2,4,46,49,50,53, RKkRipyskgqlrelereyaankfitkdkrrkisaatslserqitIwfQNrrVkekkvla > 5edn_J interface=2,4,46,49,50, rKkRipyskgqlrelereyaankfitkdkrrkisaatslserqitIwfQNrrvkekkvlak
interface signature	RKRIQNV/KRIQN

Estimated binding specificities ?

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# IC=10.511 IC/col=0.478 n_of_columns=22

specificity:

A |  96   0  88  88  58  24  24  24  24  24  24  24  24   2  24  24  24  15   2   0  96   2
C |   0   0   4   2  20  24  24  24  24  24  24  24  24   4  24  24  24  11   0   0   0  15
G |   0   0   2   4   2  24  24  24  24  24  24  24  24  75  24  24  24  15   1   0   0   2
T |   0  96   2   2  16  24  24  24  24  24  24  24  24  15  24  24  24  55  93  96   0  77

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updated Sat Dec 16 00:56:53 2023