5cby_AB : 3D-footprint complex

structure name	ANCGR2 DNA BINDING DOMAIN - (+)GRE COMPLEX
reference	Ortlund et al. Proc.Natl.Acad.Sci.USA 113 326 2016
source	UNCLASSIFIED
experiment	X-ray (resolution=2.00, R-factor=?)
structural superfamily	Glucocorticoid receptor-like DNA-binding domain;
reference complex	5cbx_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5cby_A interface=26,27,31, ppkiclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacrfrkclqagmnleark > 5cby_B interface=25,26,30, pkiclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacrfrkclqagmnle
interface signature	KVR/KVR

Estimated binding specificities ?

readout + contact

# IC=7.140 IC/col=0.549 n_of_columns=13

specificity:

A |   0  24  57   0  96  24  24  24  13   0  24  24   0
C |   0  24  13  96   0  24  24  24  16   0  24  24  96
G |  96  24  13   0   0  24  24  24  13  96  24  24   0
T |   0  24  13   0   0  24  24  24  54   0  24  24   0

scan!

home
updated Sat Dec 16 00:06:13 2023