5byg_CD : 3D-footprint complex

structure name	X-RAY STRUCTURE OF AAV2 OBD-AAVS1 COMPLEX 2:1
reference	Escalante et al. J.Biol.Chem. 290 27487 2015
source	Adeno-associated virus 2
experiment	X-ray (resolution=2.50, R-factor=?)
structural superfamily	Origin of replication-binding domain, RBD-like;
reference complex	5byg_D
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5byg_C interface=96,100,131,134, mpgfyeivikvpsgisdsfvnwvaekewelppdsdmdlnlieqapltvaeklqrdfltewrrvskapealffvqfekgesyfhmhvlvettgvksMvlgRflsqirekliqriyrgieptlpnwfavtktRngAgggnkvvdesyipnfllpktqpelqwawtnmeqylsaclnlterkrlvaqhlthvsqtq > 5byg_D interface=76,80,111, mpgfyeivikppdsdmdlnlieqapltvaeklqrdfltewrrvskapealffvqfekgesyfhmhvlvettgvksMvlgRflsqirekliqriyrgieptlpnwfavtktRngagggnkvvdesyipnfllpktqpelqwawtnmeqylsaclnlterkrlvaqhlthvsqtqeqnkenq
interface signature	MRRA/MRR

Estimated binding specificities ?

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# IC=9.667 IC/col=0.744 n_of_columns=13

specificity:

A |   0   6  24  24   3  84   3   0   7  24   7   0   3
C |   0   3  24  24   3   6   6  96  15  24   7  96   3
G |  96  84  24  24  87   3  84   0  71  24  79   0  84
T |   0   3  24  24   3   3   3   0   3  24   3   0   6

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updated Fri Dec 15 23:58:11 2023