5byg_AB : 3D-footprint complex

structure name	X-RAY STRUCTURE OF AAV2 OBD-AAVS1 COMPLEX 2:1
reference	Escalante et al. J.Biol.Chem. 290 27487 2015
source	Adeno-associated virus 2
experiment	X-ray (resolution=2.50, R-factor=?)
structural superfamily	Origin of replication-binding domain, RBD-like;
reference complex	5byg_D
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5byg_A interface=83,87,118,121, mpgfyeivikvpsewelppdsdmdlnlieqapltvaeklqrdfltewrrvskapealffvqfekgesyfhmhvlvettgvksMvlgRflsqirekliqriyrgieptlpnwfavtktRngAgggnkvvdesyipnfllpktqpelqwawtnmeqylsaclnlterkrlvaqhlthvsqtqe > 5byg_B interface=97,101,132,135, mpgfyeivikvpsdgisdsfvnwvaekewelppdsdmdlnlieqapltvaeklqrdfltewrrvskapealffvqfekgesyfhmhvlvettgvksMvlgRflsqirekliqriyrgieptlpnwfavtktRngAgggnkvvdesyipnfllpktqpelqwawtnmeqylsaclnlterkrlvaqhlthvsqtqeqnkenq
interface signature	MRRA/MRRA

Estimated binding specificities ?

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# IC=8.865 IC/col=0.739 n_of_columns=12

specificity:

A |   0   2  24   7   0   0   0   3   7  24   7  10
C |   0  92  24  71   0  96  23  69   7  24  19  84
G |  96   1  24   9  96   0   0   1  72  24  11   1
T |   0   1  24   9   0   0  73  23  10  24  59   1

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updated Fri Dec 15 23:57:56 2023