5akm_A : 3D-footprint complex

structure name	THE CRYSTAL STRUCTURE OF I-DMOI G20S IN COMPLEX WITH ITS TARGET DNA IN THE PRESENCE OF 2MM MG (HOMING ENDONUCLEASE I-DMOI)
reference	Marcaida et al. J.Biol.Chem. 290 18534 2015
source	DESULFUROCOCCUS MOBILIS
experiment	X-ray (resolution=2.40, R-factor=0.182)
structural superfamily	Homing endonucleases;
reference complex	2vs7_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5akm_A interface=21,23,25,29,30,31,33,37,66,72,73,75,77,79,151,153,154,156, envsgisayllgliisdgglYkLkYkgnRSEyRvviTqksenlikqhiaplmqflidelnvkskiQivkgdTRyElRvSskklyyyfanmlerirlfnmreqiafikglyvaegdktlkrlriwnknkalleivsrwlnnlgvrntihldDhRHgVyvlnislrdrikfvhtilsshlnplpp
interface signature	YLYRSERTQTRERSDRHV

Estimated binding specificities ?

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# IC=12.562 IC/col=1.047 n_of_columns=12

specificity:

A |   0   0  70  89   0  12   0   0   0   8   0   6
C |   0   0  12   0   0   8   0  96  96   6   0  76
G |  96   0   6   7  96   6   0   0   0  70  96   8
T |   0  96   8   0   0  70  96   0   0  12   0   6

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updated Mon Dec 18 11:51:33 2023