4zm2_CD : 3D-footprint complex

structure name	ANTITOXIN PHD FROM PHAGE P1 IN COMPLEX WITH ITS OPERATOR DNA INVERTED REPEAT IN A MONOCLINIC SPACE GROUP
reference	Garcia-Pino et al. Nat.Chem.Biol. 12 490 2016
source	Enterobacteria phage P1
experiment	X-ray (resolution=3.88, R-factor=?)
structural superfamily	YefM-like;
reference complex	4zm0_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4zm2_C interface=6,10,31, mqsinFrtaRgnlsevlnnveageeveitrRgrepavivskatfeaykkaaldae > 4zm2_D interface=6,7,10,31, mqsinFRtaRgnlsevlnnveageeveitrRgrepavivskatfeaykkaald
interface signature	FRR/FRRR

Estimated binding specificities ?

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# IC=10.325 IC/col=0.860 n_of_columns=12

specificity:

A |  91   4  24   0   4  24  96   0  96   0  39  48
C |   1   1  24   0   1  24   0  96   0  96  14  19
G |   0   0  24   0  91  24   0   0   0   0  19  25
T |   4  91  24  96   0  24   0   0   0   0  24   4

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updated Fri Dec 15 22:31:19 2023