3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.

home
updated Fri Dec 15 22:16:52 2023

structure name	NUCLEOSOME DISASSEMBLY BY RSC AND SWI/SNF IS ENHANCED BY H3 ACETYLATION NEAR THE NUCLEOSOME DYAD AXIS
reference	Bartholomew et al. Mol.Cell.Biol. 35 4083 2015
source	XENOPUS LAEVIS
experiment	X-ray (resolution=3.00, R-factor=?)
structural superfamily	Histone-fold;PH domain-like;
reference complex	4xzq_E 5gtc_H 6a5l_d 6a5l_g 6buz_H 6c0w_H 6see_H 6t7a_H 6upk_H 6x59_H 6y5d_H 6z6p_F 7d1z_H 7e8d_H 7jzv_N 7k5x_H 7k60_H 7k63_H 7pet_H 7scy_H 8h0v_h
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4ys3_A interface=3,28,46, phRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaiharvtimpdiqlarrirgera > 4ys3_B interface=9, dniqgitkPairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg > 4ys3_C interface=29, aktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkkt > 4ys3_D interface=1, Rkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak > 4ys3_E interface=2,3,4,28,46, pHRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaiharvtimpdiqlarrirgera > 4ys3_F interface=9,22, dniqgitkPairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg > 4ys3_G interface= aktrssraGlqfpvgrvhrllRkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk > 4ys3_H interface=1, Rkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak