interface graph thumbnail
legend  pdf

structure nameANTPHD WITH 15BP DI-THIOATE MODIFIED DNA DUPLEX
(Homeotic protein antennapedia)
referenceZandarashvili et al.
sourceDrosophila melanogaster
experimentX-ray (resolution=2.69, R-factor=0.219)
structural superfamilyHomeodomain-like;
sequence familyHomeobox domain;
reference complex5jlw_D
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRIQN

Estimated binding specificities ?

contactlogo
# IC=5.807 IC/col=0.968 n_of_columns=6 specificity:   
A |   0   0  96  96  13  13
C |  96   0   0   0  13  13
G |   0   0   0   0  16  57
T |   0  96   0   0  54  13
scan!

home
updated Mon Dec 18 11:32:15 2023